miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Saccharum officinarum



ABOUT THIS RECORD

ID: MNEST002463
species: Saccharum officinarum
miRNA family: MIRf1540
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGCATGGGGATGTCAAAAGGA

miRNA*
TTTTTGACGTCCCCATGTCCC

mismatches: 1
bulges: 0

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pre-miRNA
GATAGGATCCCCTTTTTGACGTCCCCATGTCCCCCCGTGTGGCGGCATGGGGATGTCAAAAGGAAAGGGATGG

dot-bracket secondary structure
......(((((((((((((((((((((((((.((......)).))))))))))))))))))))...)))))..


SIMILARITIES
miRBase no hits

PMRD osa-miRf10719-akr: 0.00000000006

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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